Biomedical Science Letters

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Table. 4.

Virulence factor gene profiles and phylogenetic groups of E. coli strains from patients with urinary tract infection isolated in 1989 and 2010-2014

1989 2010-2014
VF genotype Phylogenetic group VF genotype Phylogenetic group
F S P U C H A B1 B2 D n=123 F S P U C H A B1 B2 D n=558
+ - - - - - 10 11 13 20 54 (43.9%) + - - - - - 28 29 72 62 191 (34.2%)
+ - + - - - 1 1 (0.8%) + - + - - - 64 18 82 (14.7%)
+ - - + - - 6 6 5 17 (13.8%) + - - + - - 6 54 8 68 (12.2%)
+ + + + + + 7 7 (5.7%) + + + + + + 1 30 31 (5.6%)
- - - - - - 13 1 4 18 (14.6%) - - - - - - 15 5 4 24 (4.3%)
+ - + - + - 16 6 22 (3.9%)
+ - - - + - 1 7 12 20 (3.6%)
+ + + - + - 1 1 (0.8%) + + + - + - 1 16 17 (3.0%)
+ - + - + + 11 2 13 (2.3%)
+ - - + + - 1 1 (0.8%) + - - + + - 1 9 10 (1.8%)
+ + - - - - 1 7 1 9 (1.6%)
+ - + + - - 7 1 8 (6.5%) + - + + - - 1 3 3 7 (1.3%)
+ + + - + + 1 1 (0.8%) + + + - + + 5 1 6 (1.1%)
+ + - + + + 2 2 (1.6%) + + - + + + 6 6 (1.1%)
+ + - + - - 2 2 (1.6%) + + - + - - 6 6 (1.1%)
+ + + - - - 5 5 (0.9%)
- - - - + - 3 3 (0.5%)
+ + - + + - 1 1 (0.8%) + + - + + - 4 4 (0.7%)
+ + + + - - 5 5 (0.9%)
+ + + + + - 4 4 (0.7%)
- - - + - - 4 4 (0.7%)
- + + - + - 2 1 3 (0.5%)
- - + - - - 1 1 2 (0.4%)
+ - + + + + 2 2 (0.4%)
+ - - - - + 1 1 (0.8%) + - - - - + 1 1 (0.2%)
+ - - + - + 1 1 (0.2%)
+ - + - - + 3 3 (2.4%) + - + - - + 1 1 2 (0.4%)
+ - - - + + 1 1 (0.2%)
+ - + + + - 1 1 (0.2%)
- + + - - - 1 1 (0.2%)
+ + + + - + 1 1 (0.8%) + + + + - + 1 1 (0.2%)
+ + + + - - 1 1 (0.2%)
+ - + + + + 1 1 (0.2%)
- - - - - + 1 1 (0.2%)
+ - + + - + 4 4 (3.3%) + - + + - + 1 1 (0.2%)
- - + - - + 1 1 (0.2%)
- + - - + - 1 1 (0.2%)
- + + + + - 1 1 (0.8%)
Total 30 11 49 33 123 Total 56 31 344 127 558

Abbreviation: F, fimG/H; S, sfaD/E; P, papC; U, usp; C, cnf1; and H, hlyA

Biomed Sci Letters 2022;28:127-36 https://doi.org/10.15616/BSL.2022.28.2.127
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