Results of the Regulome DB of SNP on the
Gene | SNP | BP | A1 | A2 | Regulome DB | |||||
---|---|---|---|---|---|---|---|---|---|---|
Score | eQTL | TFBS | DNase | Proteins bound | Motifs | |||||
rs6729860 | 48644231 | C | A | 1f | + | + | + | MNT | - | |
rs3749142 | 48662098 | A | G | 1f | + | + | + | - | - | |
rs2293274 | 48640638 | T | C | 1f | + | + | + | AFF1 | - | |
rs2293272 | 48641237 | G | A | 1f | + | + | + | RBBP5, CEBPA, CTCF | ZNF423 | |
rs6741341 | 48646819 | T | A | 1f | + | + | + | - | - | |
rs2349098 | 48647787 | C | T | 1b | + | + | + | CTCF, EP300, TFAP2B | GFI1B, RUNX1 | |
rs13025488 | 48649304 | G | A | 1f | + | + | + | POLR2A, EP300, FOS, STAT3, CEBPA | MYB | |
rs6732365 | 48649911 | C | A | 1f | + | + | + | CTCF | - | |
rs12990079 | 48651427 | C | T | 1f | + | + | + | - | - | |
rs1996970 | 48651987 | C | G | 1f | + | + | + | TCF12, GATA3 | - | |
rs11681276 | 48652209 | T | G | 1f | + | + | + | ZBTB17, IKZF1 | - | |
rs11681426 | 48652500 | A | G | 1f | + | + | + | MEF2A, ZNF394, KLF16, ZBTB17, TFAP4, NFIC, CEBPA, IKZF1 | - | |
rs13027618 | 48653479 | G | C | 1f | + | + | + | CTCF, TEAD4, MAX, HDAC2, SIN3A, ZNF217, ZNF687, POLR2A, YY1, GATA3 | - | |
rs11693429 | 48655980 | G | T | 1f | + | + | + | - | - | |
rs17039250 | 48661300 | C | A | 1f | + | + | + | - | RORB, RORC | |
rs3828340 | 48661480 | C | T | 1f | + | + | + | CEBPA | - | |
rs940389 | 48661656 | C | G | 1f | + | + | + | CEBPA | - | |
rs3749144 | 48662386 | A | T | 1d | + | + | + | NR2F2 | RARB, RARG, RXRB | |
rs3749145 | 48662402 | T | C | 1f | + | + | + | NR2F2 | - | |
rs3792234 | 48663097 | T | G | 1f | + | + | + | - | - | |
rs3792235 | 48663260 | C | T | 1f | + | + | + | - | - | |
rs13011288 | 48663571 | T | C | 1f | + | + | + | - | - | |
rs12992755 | 48663621 | C | T | 1f | + | + | + | - | TFAP4 | |
rs11680574 | 48664120 | G | A | 1f | + | + | + | - | - | |
rs10495953 | 48665358 | T | C | 1f | + | + | + | GATA3, SIN3A, TCF12, E2F1, DPF2, ZBTB7B, SMARCE1, ESR1, ZNF217, CTBP1 | - | |
rs4566410 | 48665387 | C | T | 1f | + | + | + | GATA3, SIN3A, TCF12, E2F1, DPF2, ZBTB7B, SMARCE1, ESR1, ZNF217, CTBP1 | - | |
rs11693559 | 48665452 | A | C | 1f | + | + | + | GATA3, SIN3A, TCF12, E2F1, DPF2, ZBTB7B, ESR1, ZNF217, CTBP1 | - | |
rs11693691 | 48665568 | C | G | 1b | + | + | + | SIN3A, TCF12, E2F1, ZBTB7B, ESR1, ZNF217, CTBP1 | SMAD2 | |
rs11678306 | 48665635 | G | T | 1f | + | + | + | SIN3A, E2F1, ZBTB7B | - | |
rs3792237 | 48666332 | A | G | 1f | + | + | + | SP1, CHD7, STAT6, ERG, GTF2I, ZNF462, MAX, FOXK1, ZNF138, ZNF532 | - |
SNP, single nucleotide polymorphism; BP, base pair; A1, minor allele; A2, major allele; eQTL, expression quantitation trait loci; TFBS, transcription factor binding site.